File:HIV-SIV-phylogenetic-tree-en.svg

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Captions

Captions

Phylogenetic tree of the SIV and HIV viruses

Summary

[edit]
Description
English: Phylogenetic Tree of the SIV and HIV viruses.

Viruses depicted:

  • Human
    • HIV-1 M (Main) group, including reference strains from subtypes A-J. Group M is responsible for the pandemic.(Reference strains: A_UG.U455, A_KE.Q2317, B_US.JRFL, B_US.WEAU160, C_ET.ETH2220, C_IN.21068, D_ZR.NDK, D_ZR.ELI, F_FI.FIN6393, F_BE.VI850, G_SE.SE6165, G_BE.DRCBL, H_CF.90CF056, H_BE.VI997, J_SE.SE91733, J_SE.SE92809, and CRF01 AE_CF.90CF402 and AE_TH.CM240, which are subtype A in pol.)
    • HIV-1 O (Outlier) group, most commonly found in West Africa. (Reference strains: O_CM.ANT70, O_CM.MVP5180)
    • HIV-1 N (Not-M, Not-O) group, found in a very small number of individuals in West Africa. (Reference strain N_CM.YBF30)
    • HIV-2 subtypes A and B: H2A_DE.BEN, H2A_SN.ST, H2B_GH.D205, and H2B_CI.EHO
  • Simian
    • SIVcpz from chimpanzee Pan troglodytes troglodytes (P.t.t.):
      • SIVcpz.GAB, SIVcpz.US, and SIVcpz.Cam3
    • SIVcpz from chimpanzee Pan troglodytes shweinfuthii (P.t.s.): SIVcpz.ANT
    • SIV African Green Monkey (SIVagm):
      • Tantalus (TAN): SIVagm.TAN1
      • Vervet (VER): SIVagm.VERTYO, SIVagm.VERAGM3, SIVagm.VER9063, SIVagm.VER155
      • Grivet (GRI): SIVagm.GRI677
      • Sabaeus (SAB): SIVagm.SAB1C
    • SIV Sooty Mangaby (SIVsm) (also found in captive macaques): SIVsm.mac251, SIVsm.smm9
    • SIV L'Hoest's: SIV.LHOEST
    • SIV Mandrill: SIV.MNDGB1
    • SIV Sun: SIV.SUN
Based on work by the Theoretical Biology and Biophysics Group, Los Alamos National Laboratory.
Date
Source This file was derived from: HIV-SIV-phylogenetic-tree straight.svg
Author Exobiotic
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